Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CLCN6 ENSBTAG00000020700

.

Description

chloride voltage-gated channel 6 [Source:VGNC Symbol;Acc:VGNC:27400]

Location

Primary_assembly 16: 41,841,830-41,873,724 reverse strand.

ARS-UCD1.3:CM008183.2

About this gene

This gene has 4 transcripts (splice variants), 212 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000027587.5	CLCN6-203	2859	870aa	ENSBTAP00000027587.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BK15	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000095787.1	CLCN6-204	2793	848aa	ENSBTAP00000078843.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000111623.1	CLCN6-201	2782	842aa	ENSBTAP00000087070.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000089967.1	CLCN6-202	2692	812aa	ENSBTAP00000103478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.