Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ABCC9 ENSBTAG00000019294

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Description

ATP binding cassette subfamily C member 9 [Source:VGNC Symbol;Acc:VGNC:25476]

Location

Primary_assembly 5: 88,169,116-88,442,014 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 232 orthologues and 43 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000073196.2	ABCC9-203	6668	1569aa	ENSBTAP00000072221.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NJB7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000043069.5	ABCC9-205	5850	1549aa	ENSBTAP00000040663.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B8L0	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000068051.2	ABCC9-204	4849	1549aa	ENSBTAP00000064511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LV78	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000127277.1	ABCC9-201	670	156aa	ENSBTAP00000085562.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000115429.1	ABCC9-202	652	151aa	ENSBTAP00000078491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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