Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNFSF10 ENSBTAG00000018994

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Description

TNF superfamily member 10 [Source:VGNC Symbol;Acc:VGNC:36172]

Location

Primary_assembly 1: 94,984,481-95,002,223 forward strand.

ARS-UCD1.3:CM008168.2

About this gene

This gene has 4 transcripts (splice variants), 241 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000025281.6	TNFSF10-201	1465	347aa	ENSBTAP00000025281.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BE56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000090028.1	TNFSF10-202	2111	281aa	ENSBTAP00000094932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000132319.1	TNFSF10-203	1909	289aa	ENSBTAP00000076937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000091704.1	TNFSF10-204	1886	287aa	ENSBTAP00000099709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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