Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SETBP1 ENSBTAG00000018088

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Description

SET binding protein 1 [Source:VGNC Symbol;Acc:VGNC:34491]

Location

Primary_assembly 24: 44,277,350-44,682,326 forward strand.

ARS-UCD1.3:CM008191.2

About this gene

This gene has 9 transcripts (splice variants), 226 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000024078.6	SETBP1-205	5988	1595aa	ENSBTAP00000024078.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MHB3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000120782.1	SETBP1-202	4916	1538aa	ENSBTAP00000077997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000102220.1	SETBP1-204	4878	1538aa	ENSBTAP00000095290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000079033.2	SETBP1-206	4789	1525aa	ENSBTAP00000060730.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MXX5	-
ENSBTAT00000089859.1	SETBP1-203	1225	193aa	ENSBTAP00000093381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000099044.1	SETBP1-201	1145	199aa	ENSBTAP00000098889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000117881.1	SETBP1-208	824	197aa	ENSBTAP00000099876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000101509.1	SETBP1-207	804	209aa	ENSBTAP00000086812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000123151.1	SETBP1-209	747	196aa	ENSBTAP00000075628.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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