Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TUFT1 ENSBTAG00000017566

.

Description

tuftelin 1 [Source:VGNC Symbol;Acc:VGNC:36518]

Location

Primary_assembly 3: 19,199,747-19,250,796 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 252 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000046403.2	TUFT1-201	2686	390aa	ENSBTAP00000043710.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MRE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000023368.7	TUFT1-202	2620	368aa	ENSBTAP00000023368.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MYM6	-
ENSBTAT00000063199.3	TUFT1-203	2611	365aa	ENSBTAP00000055228.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N071	-
ENSBTAT00000057204.4	TUFT1-204	2596	360aa	ENSBTAP00000048998.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1B7J6	-
ENSBTAT00000074435.2	TUFT1-205	1560	365aa	ENSBTAP00000069749.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGN7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

.

Summary

.

.