Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TTC4 ENSBTAG00000015931

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Description

tetratricopeptide repeat domain 4 [Source:VGNC Symbol;Acc:VGNC:36478]

Location

Primary_assembly 3: 91,536,057-91,564,929 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 3 transcripts (splice variants), 207 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000068630.2	TTC4-203	2274	419aa	ENSBTAP00000071477.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58DN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000076834.2	TTC4-201	4252	350aa	ENSBTAP00000059350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LQV4	-
ENSBTAT00000021186.6	TTC4-202	3992	406aa	ENSBTAP00000021186.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58DN8	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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