Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HGD ENSBTAG00000015895

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Description

homogentisate 1,2-dioxygenase [Source:VGNC Symbol;Acc:VGNC:29833]

Location

Primary_assembly 1: 65,337,969-65,380,604 reverse strand.

ARS-UCD1.3:CM008168.2

About this gene

This gene has 4 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000079549.2	HGD-203	1935	512aa	ENSBTAP00000066622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N7G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000061425.3	HGD-204	1612	445aa	ENSBTAP00000053295.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8YB76	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000087453.2	HGD-201	1541	447aa	ENSBTAP00000057899.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LS65	-
ENSBTAT00000110464.1	HGD-202	1532	444aa	ENSBTAP00000091462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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