Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
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Gene: ARHGEF4 ENSBTAG00000015834

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Description

Rho guanine nucleotide exchange factor 4 [Source:VGNC Symbol;Acc:VGNC:55325]

Location

Primary_assembly 2: 1,533,355-1,864,849 forward strand.

ARS-UCD2.0:CM008169.2

About this gene

This gene has 6 transcripts (splice variants) and 24 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000150183.1	ARHGEF4-205	7045	1939aa	ENSBTAP00000105348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000086719.2	ARHGEF4-202	6840	1926aa	ENSBTAP00000059272.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LJ25	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000151022.1	ARHGEF4-204	6829	1925aa	ENSBTAP00000106524.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000129251.1	ARHGEF4-203	6660	1866aa	ENSBTAP00000092400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9T929	-
ENSBTAT00000117469.1	ARHGEF4-201	4317	1427aa	ENSBTAP00000098676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9TNQ5	-
ENSBTAT00000021041.7	ARHGEF4-206	3277	683aa	ENSBTAP00000021041.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MAZ5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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