Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC171 ENSBTAG00000015788

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Description

coiled-coil domain containing 171 [Source:VGNC Symbol;Acc:VGNC:26868]

Location

Primary_assembly 8: 28,432,123-28,771,603 reverse strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 7 transcripts (splice variants) and 124 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000065456.3	CCDC171-203	5205	1334aa	ENSBTAP00000054143.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MX83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000130075.1	CCDC171-202	5315	1303aa	ENSBTAP00000093377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000078315.2	CCDC171-201	5073	1290aa	ENSBTAP00000070686.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MIW4	-
ENSBTAT00000020964.7	CCDC171-204	3914	1224aa	ENSBTAP00000020964.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MQ32	-
ENSBTAT00000092932.1	CCDC171-205	2232	588aa	ENSBTAP00000080747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000105817.1	CCDC171-206	1432	293aa	ENSBTAP00000101864.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000101851.1	CCDC171-207	1381	351aa	ENSBTAP00000085418.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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