Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Pathway
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ID History
- Gene history

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Gene: PUM3 ENSBTAG00000013357

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Description

pumilio RNA binding family member 3 [Source:VGNC Symbol;Acc:VGNC:33571]

Location

Primary_assembly 8: 41,634,705-41,778,313 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 4 transcripts (splice variants) and 213 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000128458.1	PUM3-202	2391	735aa	ENSBTAP00000093630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000127726.1	PUM3-201	2399	668aa	ENSBTAP00000076680.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000017765.6	PUM3-203	2082	620aa	ENSBTAP00000017765.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VDN9	-
ENSBTAT00000093104.1	PUM3-204	1934	604aa	ENSBTAP00000092086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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