Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: R3HDM1 ENSBTAG00000013302

.

Description

R3H domain containing 1 [Source:VGNC Symbol;Acc:VGNC:57358]

Location

Primary_assembly 2: 61,636,481-61,799,720 reverse strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 5 transcripts (splice variants), 228 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074294.2	R3HDM1-202	4649	1132aa	ENSBTAP00000058941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPS2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000085926.2	R3HDM1-203	4610	1071aa	ENSBTAP00000063881.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1Q0	-
ENSBTAT00000017695.7	R3HDM1-204	4559	1054aa	ENSBTAP00000017695.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BDH6	-
ENSBTAT00000087971.1	R3HDM1-205	4304	969aa	ENSBTAP00000081074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000087430.2	R3HDM1-201	4130	1042aa	ENSBTAP00000067328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M1T6	-

.

Summary

.

.