Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CLIP2 ENSBTAG00000011875

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Description

CAP-Gly domain containing linker protein 2 [Source:VGNC Symbol;Acc:VGNC:27445]

Location

Primary_assembly 25: 33,057,243-33,130,818 reverse strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 4 transcripts (splice variants), 207 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000095473.1	CLIP2-201	3991	1052aa	ENSBTAP00000075385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000080157.2	CLIP2-202	4054	1047aa	ENSBTAP00000061932.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N033	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000110945.1	CLIP2-203	3862	983aa	ENSBTAP00000088657.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000015759.6	CLIP2-204	3343	1047aa	ENSBTAP00000015759.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BGH3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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