Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NSL1 ENSBTAG00000011340

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Description

NSL1 component of MIS12 kinetochore complex [Source:VGNC Symbol;Acc:VGNC:32277]

Location

Primary_assembly 16: 70,703,959-70,806,428 forward strand.

ARS-UCD1.3:CM008183.2

About this gene

This gene has 4 transcripts (splice variants) and 195 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000088214.1	NSL1-202	2231	275aa	ENSBTAP00000079063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000123594.1	NSL1-201	2100	262aa	ENSBTAP00000096759.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000043854.5	NSL1-204	1895	219aa	ENSBTAP00000041396.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QQ16	-
ENSBTAT00000093503.1	NSL1-203	550	172aa	ENSBTAP00000080825.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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