Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RNPS1 ENSBTAG00000009969

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Description

RNA binding protein with serine rich domain 1 [Source:NCBI gene (formerly Entrezgene);Acc:504506]

Location

Primary_assembly 25: 1,778,571-1,787,724 reverse strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 5 transcripts (splice variants), 264 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000070150.2	RNPS1-204	1907	367aa	ENSBTAP00000061322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MYX0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000078713.2	RNPS1-202	1951	326aa	ENSBTAP00000067106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QR16	-
ENSBTAT00000013151.6	RNPS1-203	1852	305aa	ENSBTAP00000013151.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QR16 M5FJW8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000068914.2	RNPS1-205	1819	282aa	ENSBTAP00000073960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MPU8	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000089644.1	RNPS1-201	1407	211aa	ENSBTAP00000099228.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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