Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: NCBP1 ENSBTAG00000009732

.

Description

nuclear cap binding protein subunit 1 [Source:VGNC Symbol;Acc:VGNC:31907]

Location

Primary_assembly 8: 62,840,870-62,878,151 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 5 transcripts (splice variants) and 208 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000061170.4	NCBP1-204	3058	790aa	ENSBTAP00000053621.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BMM0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000012833.6	NCBP1-205	2950	754aa	ENSBTAP00000012833.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A6QNR9	-
ENSBTAT00000122945.1	NCBP1-202	1777	314aa	ENSBTAP00000078546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000131497.1	NCBP1-203	1358	332aa	ENSBTAP00000079485.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000116631.1	NCBP1-201	501	82aa	ENSBTAP00000093579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

.

Summary

.

.