Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPA1 ENSBTAG00000009711

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Description

replication protein A1 [Source:VGNC Symbol;Acc:VGNC:34094]

Location

Primary_assembly 19: 22,900,174-22,948,502 forward strand.

ARS-UCD1.3:CM008186.2

About this gene

This gene has 3 transcripts (splice variants) and 270 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000075195.2	RPA1-201	2863	616aa	ENSBTAP00000066113.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MBP4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000089346.1	RPA1-202	2875	597aa	ENSBTAP00000088686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000012812.5	RPA1-203	2723	596aa	ENSBTAP00000012812.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0VCV0	-

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Summary

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