Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CDH16 ENSBTAG00000009585

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Description

cadherin 16 [Source:VGNC Symbol;Acc:VGNC:27095]

Location

Primary_assembly 18: 34,613,302-34,623,215 reverse strand.

ARS-UCD1.3:CM008185.2

About this gene

This gene has 4 transcripts (splice variants), 93 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000012610.4	CDH16-203	2840	829aa	ENSBTAP00000012610.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5E9G7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000129940.1	CDH16-204	2549	732aa	ENSBTAP00000081151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000085230.2	CDH16-202	2518	749aa	ENSBTAP00000065155.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M5H4	-
ENSBTAT00000053706.3	CDH16-201	2391	672aa	ENSBTAP00000048360.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7E335	-

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Summary

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