Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SCUBE3 ENSBTAG00000009226

.

Description

signal peptide, CUB domain and EGF like domain containing 3 [Source:VGNC Symbol;Acc:VGNC:34373]

Location

Primary_assembly 23: 9,192,069-9,225,848 forward strand.

ARS-UCD1.3:CM008190.2

About this gene

This gene has 7 transcripts (splice variants), 199 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000076067.2	SCUBE3-205	4344	1065aa	ENSBTAP00000062191.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000068294.2	SCUBE3-201	4310	1009aa	ENSBTAP00000058402.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LN75	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000012158.6	SCUBE3-202	4262	993aa	ENSBTAP00000012158.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BJX6	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000073263.2	SCUBE3-203	4151	956aa	ENSBTAP00000058601.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LTW4	-
ENSBTAT00000087194.2	SCUBE3-204	4148	955aa	ENSBTAP00000070809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJ69	-
ENSBTAT00000086873.2	SCUBE3-206	4133	995aa	ENSBTAP00000056864.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LFE3	-
ENSBTAT00000068477.2	SCUBE3-207	3467	989aa	ENSBTAP00000073264.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MG91	-

.

Summary

.

.