Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TRRAP ENSBTAG00000007113

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Description

transformation/transcription domain associated protein [Source:VGNC Symbol;Acc:VGNC:36403]

Location

Primary_assembly 25: 37,265,876-37,353,932 reverse strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 3 transcripts (splice variants), 235 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000106438.1	TRRAP-201	12376	3874aa	ENSBTAP00000084652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000126484.1	TRRAP-202	12334	3860aa	ENSBTAP00000089417.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000009365.7	TRRAP-203	12301	3849aa	ENSBTAP00000009365.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BKJ5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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