Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Pathway
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PWP2 ENSBTAG00000007105

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Description

PWP2 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:9711]

Location

Primary_assembly 1: 144,133,981-144,148,079 forward strand.

ARS-UCD1.3:CM008168.2

About this gene

This gene has 3 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000009343.7	PWP2-203	3937	948aa	ENSBTAP00000009343.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BL00	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000107991.1	PWP2-202	3990	881aa	ENSBTAP00000078731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000078536.2	PWP2-201	3888	947aa	ENSBTAP00000072174.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NJ83	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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