Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP48 ENSBTAG00000006940

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Description

ubiquitin specific peptidase 48 [Source:VGNC Symbol;Acc:VGNC:36733]

Location

Primary_assembly 2: 131,013,166-131,086,239 forward strand.

ARS-UCD1.3:CM008169.2

About this gene

This gene has 5 transcripts (splice variants), 215 orthologues and 45 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133357.1	USP48-201	3992	1036aa	ENSBTAP00000100966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000110291.1	USP48-202	3836	984aa	ENSBTAP00000097222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000097305.1	USP48-203	3798	1001aa	ENSBTAP00000079946.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000009110.7	USP48-204	3502	975aa	ENSBTAP00000009110.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BF92	-
ENSBTAT00000084478.2	USP48-205	3414	949aa	ENSBTAP00000061492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M0I2	-

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Summary

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