Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: OTX1 ENSBTAG00000006760

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Description

orthodenticle homeobox 1 [Source:VGNC Symbol;Acc:VGNC:32502]

Location

Primary_assembly 11: 61,544,005-61,551,150 forward strand.

ARS-UCD2.0:CM008178.2

About this gene

This gene has 1 transcript (splice variant), 196 orthologues and 44 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000008893.4	OTX1-201	2268	355aa	ENSBTAP00000008893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BL43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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