Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PATL1 ENSBTAG00000005913

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Description

PAT1 homolog 1, processing body mRNA decay factor [Source:VGNC Symbol;Acc:VGNC:32593]

Location

Primary_assembly 15: 82,824,636-82,859,455 reverse strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 4 transcripts (splice variants), 213 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000107700.1	PATL1-203	3528	775aa	ENSBTAP00000088575.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000007768.6	PATL1-202	4067	771aa	ENSBTAP00000007768.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N1E7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000072254.2	PATL1-201	3472	769aa	ENSBTAP00000061065.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMH1	-
ENSBTAT00000088834.1	PATL1-204	812	214aa	ENSBTAP00000102885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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