Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNGR1 ENSBTAG00000005765

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Description

synaptogyrin 1 [Source:VGNC Symbol;Acc:VGNC:35524]

Location

Primary_assembly 5: 110,778,235-110,805,984 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 6 transcripts (splice variants), 245 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000110079.1	SYNGR1-202	1752	239aa	ENSBTAP00000086532.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000121623.1	SYNGR1-206	1737	234aa	ENSBTAP00000098878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000042673.3	SYNGR1-205	815	191aa	ENSBTAP00000040308.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SZ33	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000066746.2	SYNGR1-204	711	186aa	ENSBTAP00000058045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMT7	-
ENSBTAT00000080189.2	SYNGR1-203	541	170aa	ENSBTAP00000071328.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NHB1	-
ENSBTAT00000113900.1	SYNGR1-201	388	118aa	ENSBTAP00000089766.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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