Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CNGB1 ENSBTAG00000005702

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Description

cyclic nucleotide gated channel subunit beta 1 [Source:VGNC Symbol;Acc:VGNC:27501]

Location

Primary_assembly 18: 25,813,506-25,880,192 reverse strand.

ARS-UCD1.3:CM008185.2

About this gene

This gene has 8 transcripts (splice variants), 77 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000102381.1	CNGB1-206	4545	1385aa	ENSBTAP00000103951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000063004.3	CNGB1-204	3202	940aa	ENSBTAP00000055137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MZY3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000032433.5	CNGB1-201	3193	937aa	ENSBTAP00000032365.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTS7	-
ENSBTAT00000007490.7	CNGB1-205	3172	930aa	ENSBTAP00000007490.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N3J4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000032434.4	CNGB1-202	3157	925aa	ENSBTAP00000032366.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MTS6	-
ENSBTAT00000064084.3	CNGB1-203	3151	923aa	ENSBTAP00000056058.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N2E6	-
ENSBTAT00000064172.3	CNGB1-207	1754	581aa	ENSBTAP00000054194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MXC9	-
ENSBTAT00000065243.3	CNGB1-208	1414	299aa	ENSBTAP00000055261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N0A4	-

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Summary

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