Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TTC39C ENSBTAG00000005635

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Description

tetratricopeptide repeat domain 39C [Source:VGNC Symbol;Acc:VGNC:36477]

Location

Primary_assembly 24: 32,559,389-32,663,151 reverse strand.

ARS-UCD1.3:CM008191.2

About this gene

This gene has 5 transcripts (splice variants), 272 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000134234.1	TTC39C-202	2937	578aa	ENSBTAP00000077552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000093163.1	TTC39C-201	2654	545aa	ENSBTAP00000081758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000007408.6	TTC39C-204	2572	572aa	ENSBTAP00000007408.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1N480	-
ENSBTAT00000126700.1	TTC39C-203	2497	542aa	ENSBTAP00000091185.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000076467.2	TTC39C-205	1233	185aa	ENSBTAP00000067247.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAK1	-

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Summary

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