Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: COL20A1 ENSBTAG00000004582

.

Description

collagen type XX alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:27562]

Location

Primary_assembly 13: 54,262,435-54,281,686 reverse strand.

ARS-UCD1.3:CM008180.2

About this gene

This gene has 3 transcripts (splice variants), 114 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000063888.3	COL20A1-201	4011	1336aa	ENSBTAP00000055176.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3N021	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000006018.6	COL20A1-202	3885	1294aa	ENSBTAP00000006018.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BFY7	-
ENSBTAT00000065814.3	COL20A1-203	3552	1183aa	ENSBTAP00000055054.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3MZQ1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.