Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM5 ENSBTAG00000002332

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Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:31057]

Location

Primary_assembly 4: 64,014,974-64,018,569 forward strand.

ARS-UCD1.3:CM008171.2

About this gene

This gene has 3 transcripts (splice variants), 216 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000086189.2	LSM5-201	1035	91aa	ENSBTAP00000062464.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2HJH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000089586.1	LSM5-203	1211	90aa	ENSBTAP00000080970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000003010.3	LSM5-202	1035	91aa	ENSBTAP00000003010.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DIH2	-

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Summary

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