Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: RRP12 ENSBTAG00000002191

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Description

ribosomal RNA processing 12 homolog [Source:VGNC Symbol;Acc:VGNC:34169]

Location

Primary_assembly 26: 18,603,858-18,632,773 reverse strand.

ARS-UCD1.3:CM008193.2

About this gene

This gene has 3 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000083851.2	RRP12-203	4449	1341aa	ENSBTAP00000061352.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M070	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000002844.7	RRP12-201	4193	1236aa	ENSBTAP00000002844.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BNA1	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000103650.1	RRP12-202	4076	1197aa	ENSBTAP00000082386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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