Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: NOVA1 ENSBTAG00000002170

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Description

NOVA alternative splicing regulator 1 [Source:VGNC Symbol;Acc:VGNC:84869]

Location

Primary_assembly 21: 36,712,104-36,878,645 reverse strand.

ARS-UCD1.3:CM008188.2

About this gene

This gene has 6 transcripts (splice variants), 289 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000124918.1	NOVA1-201	3927	507aa	ENSBTAP00000076015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MK43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000031237.6	NOVA1-202	1781	483aa	ENSBTAP00000031193.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6W8 F1MBI6	-
ENSBTAT00000071088.2	NOVA1-204	1483	179aa	ENSBTAP00000060203.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LKP6	-
ENSBTAT00000068853.2	NOVA1-203	1258	207aa	ENSBTAP00000069914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MH10	-
ENSBTAT00000120675.1	NOVA1-206	711	121aa	ENSBTAP00000100072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000129070.1	NOVA1-205	562	109aa	ENSBTAP00000079133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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