Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SNX27 ENSBTAG00000001942

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Description

sorting nexin 27 [Source:VGNC Symbol;Acc:VGNC:35105]

Location

Primary_assembly 3: 19,084,833-19,166,107 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 8 transcripts (splice variants), 269 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117570.1	SNX27-203	2115	599aa	ENSBTAP00000089397.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000127488.1	SNX27-202	2480	540aa	ENSBTAP00000093498.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000103539.1	SNX27-205	2291	541aa	ENSBTAP00000081550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000103681.1	SNX27-201	2249	554aa	ENSBTAP00000091273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000104537.1	SNX27-206	2141	491aa	ENSBTAP00000080785.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000081032.2	SNX27-204	1770	527aa	ENSBTAP00000057873.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKA5	-
ENSBTAT00000033845.6	SNX27-208	1704	527aa	ENSBTAP00000033754.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A452DJ53	-
ENSBTAT00000095461.1	SNX27-207	1218	406aa	ENSBTAP00000078386.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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