Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PALLD ENSBTAG00000001081

.

Description

palladin, cytoskeletal associated protein [Source:VGNC Symbol;Acc:VGNC:32557]

Location

Primary_assembly 8: 714,589-1,068,986 forward strand.

ARS-UCD1.3:CM008175.2

About this gene

This gene has 5 transcripts (splice variants), 223 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000072269.2	PALLD-201	3909	1302aa	ENSBTAP00000061155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MYK9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000081479.2	PALLD-204	4235	766aa	ENSBTAP00000070446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MGW5	-
ENSBTAT00000103107.1	PALLD-205	3862	653aa	ENSBTAP00000090115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000073285.2	PALLD-202	3858	1285aa	ENSBTAP00000057406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LG90	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000001432.6	PALLD-203	3471	1156aa	ENSBTAP00000001432.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MJW5	-

.

Summary

.

.