Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SF1 ENSBTAG00000001035

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Description

splicing factor 1 [Source:VGNC Symbol;Acc:VGNC:34505]

Location

Primary_assembly 29: 43,002,576-43,017,881 reverse strand.

ARS-UCD1.3:CM008196.2

About this gene

This gene has 5 transcripts (splice variants), 185 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000133157.1	SF1-203	3846	755aa	ENSBTAP00000078549.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000097406.1	SF1-201	3465	754aa	ENSBTAP00000076613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000001376.7	SF1-204	3365	719aa	ENSBTAP00000001376.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VDM7	-
ENSBTAT00000124987.1	SF1-202	3156	601aa	ENSBTAP00000084239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000085486.2	SF1-205	1869	578aa	ENSBTAP00000064187.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M720	-

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Summary

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