Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POC1B ENSBTAG00000000687

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Description

POC1 centriolar protein B [Source:VGNC Symbol;Acc:VGNC:50158]

Location

Primary_assembly 5: 19,295,432-19,400,102 reverse strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 5 transcripts (splice variants), 152 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000076347.2	POC1B-201	2684	477aa	ENSBTAP00000060880.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LUP6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000067805.2	POC1B-204	2633	460aa	ENSBTAP00000070972.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MJK6	-
ENSBTAT00000000919.6	POC1B-202	2453	455aa	ENSBTAP00000000919.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PKH9	-
ENSBTAT00000089610.1	POC1B-203	2441	451aa	ENSBTAP00000075677.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000079434.2	POC1B-205	2406	456aa	ENSBTAP00000067578.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAE7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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