Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: lsm6 ENSXMAG00000009606

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Description

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]

Location

Primary_assembly 5: 4,263,745-4,290,639 forward strand.

X_maculatus-5.0-male:CM008942.1

About this gene

This gene has 3 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXMAT00000009640.2	lsm6-203	654	80aa	ENSXMAP00000009626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M4A582	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXMAT00000042476.1	lsm6-202	2709	77aa	ENSXMAP00000031896.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5QMG7	-
ENSXMAT00000026163.1	lsm6-201	423	80aa	ENSXMAP00000040922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3B5RB53	-

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Summary

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