Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prpf38a ENSXETG00000008060

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Description

pre-mRNA processing factor 38A [Source:Xenbase;Acc:XB-GENE-979997]

Location

Primary_assembly 4: 96,674,327-96,687,730 forward strand.

UCB_Xtro_10.0:CM004446.2

About this gene

This gene has 2 transcripts (splice variants), 239 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000052923.4	prpf38a-202	1199	312aa	ENSXETP00000052923.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5S6P178 B0JYW3 Q28H87	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000108011.1	prpf38a-201	1296	299aa	ENSXETP00000106640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803JFI2	-

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Summary

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