Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: prpf40a ENSXETG00000021713

.

Description

pre-mRNA processing factor 40 homolog A [Source:Xenbase;Acc:XB-GENE-988694]

Location

Primary_assembly 9: 75,694,795-75,718,127 forward strand.

UCB_Xtro_10.0:CM004451.2

About this gene

This gene has 5 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSXETT00000046954.4	prpf40a-205	3542	928aa	ENSXETP00000046954.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6R9S2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSXETT00000068156.2	prpf40a-203	3574	902aa	ENSXETP00000085622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8RYI2	-
ENSXETT00000100720.2	prpf40a-204	3541	891aa	ENSXETP00000091128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8SF93	-
ENSXETT00000075585.2	prpf40a-201	2951	896aa	ENSXETP00000070190.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8QBW0	-
ENSXETT00000092772.2	prpf40a-202	2738	870aa	ENSXETP00000077971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6I8R7S4	-

.

Summary

.

.