Transcript: ENSSSCT00000015725.5 HDAC3-202

Description

histone deacetylase 3 [Source:VGNC Symbol;Acc:VGNC:88814]

Location

About this transcript

This transcript has 15 exons, is annotated with 18 domains and features, is associated with 954 variant alleles and maps to 21 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000047350.3	HDAC3-201	2040	520aa	ENSSSCP00000051591.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B575	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000015725.5	HDAC3-202	1998	502aa	ENSSSCP00000015310.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2Z4Z6	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,998 bps, Translation length: 502 residues

Version

ENSSSCT00000015725.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.