poly(U) binding splicing factor 60 [Source:VGNC Symbol;Acc:VGNC:98841]
Primary_assembly 4: 812,131-824,318 forward strand.
Sscrofa11.1:CM000815.5
This gene has 6 transcripts (splice variants), 261 orthologues and 23 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| ENSSSCT00000069398.2 | PUF60-204 | 5253 | 597aa | ENSSSCP00000065991.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QPK1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, |
| ENSSSCT00000058386.3 | PUF60-203 | 5446 | 587aa | ENSSSCP00000049143.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287AYW3 A0A8D1DJU1 | - |
| ENSSSCT00000053414.2 | PUF60-202 | 5382 | 570aa | ENSSSCP00000053976.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287BBR9 A0A8D1AZK8 | - |
| ENSSSCT00000086350.2 | PUF60-201 | 2218 | 583aa | ENSSSCP00000064964.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2R331 A0A8D1NEZ4 | - |
| ENSSSCT00000059754.3 | PUF60-205 | 1983 | 559aa | ENSSSCP00000057986.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A480V822 A0A8D1D2Y5 | APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, |
| ENSSSCT00000029289.4 | PUF60-206 | 1876 | 513aa | ENSSSCP00000028171.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A8D1B901 I3LVL9 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
