Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM4 ENSSSCG00000034314

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Description

LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:VGNC Symbol;Acc:VGNC:89874]

Location

Primary_assembly 2: 59,499,564-59,513,246 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 2 transcripts (splice variants), 192 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000097933.1	LSM4-201	1064	139aa	ENSSSCP00000080966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FR34	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000063468.3	LSM4-202	1026	125aa	ENSSSCP00000044606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AKQ5 A0A4X1U7M5	-

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Summary

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