Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: YBX1 ENSSSCG00000028485

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Description

Y-box binding protein 1 [Source:VGNC Symbol;Acc:VGNC:98681]

Location

Primary_assembly 6: 168,716,772-168,736,604 reverse strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 173 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000026666.4	YBX1-201	1682	323aa	ENSSSCP00000022947.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LFV4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000055234.3	YBX1-203	1445	293aa	ENSSSCP00000049359.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AZS5	-
ENSSSCT00000046393.4	YBX1-202	1282	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

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Summary

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