Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PRPF18 ENSSSCG00000026354

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Description

pre-mRNA processing factor 18 [Source:VGNC Symbol;Acc:VGNC:108278]

Location

Primary_assembly 10: 48,061,728-48,164,499 reverse strand.

Sscrofa11.1:CM000821.5

About this gene

This gene has 3 transcripts (splice variants) and 209 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024330.4	PRPF18-202	5655	342aa	ENSSSCP00000027625.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VY37 A0A8D2CA23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000061232.2	PRPF18-203	5839	338aa	ENSSSCP00000049778.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B0Z6 A0A8D0WC89	-
ENSSSCT00000058845.2	PRPF18-201	5565	319aa	ENSSSCP00000034045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZQZ9 A0A4X1VY33	-

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Summary

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