Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM5 ENSSSCG00000026064

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Description

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:UniProtKB Gene Name;Acc:A0A5G2RD92]

Location

Primary_assembly 18: 40,752,461-40,755,906 forward strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 2 transcripts (splice variants), 185 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000028105.4	LSM5-202	526	91aa	ENSSSCP00000025145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SQM6 A0A8D1M2P9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000087262.2	LSM5-201	217	64aa	ENSSSCP00000068664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RD92 A0A8D1SNE8	-

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Summary

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