Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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  - Gene tree
  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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ID History
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Gene: BDH2 ENSSSCG00000022282

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Description

3-hydroxybutyrate dehydrogenase 2 [Source:VGNC Symbol;Acc:VGNC:85793]

Location

Primary_assembly 8: 117,969,998-117,995,215 forward strand.

Sscrofa11.1:CM000819.5

About this gene

This gene has 2 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000024244.3	BDH2-202	2713	245aa	ENSSSCP00000023473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UMD2 I3LHC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000061841.2	BDH2-201	945	240aa	ENSSSCP00000034457.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZSA7 A0A8D1TP76	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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