Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: LSM8 ENSSSCG00000021652

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Description

LSM8 homolog, U6 small nuclear RNA associated [Source:VGNC Symbol;Acc:VGNC:89877]

Location

Primary_assembly 18: 28,108,308-28,130,330 reverse strand.

Sscrofa11.1:CM000829.5

About this gene

This gene has 3 transcripts (splice variants), 210 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000087769.2	LSM8-203	3248	127aa	ENSSSCP00000068189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0SXC9 A0A8D0Y3G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000018096.5	LSM8-202	448	96aa	ENSSSCP00000017606.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1W3A0 A0A8D0Z7I4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000091733.1	LSM8-201	364	88aa	ENSSSCP00000075215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4F8R8	-

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Summary

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