Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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- GO: Anatomical entity
Phenotypes
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Molecular interactions
External references
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ID History
- Gene history

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Gene: SUPT6H ENSSSCG00000017773

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Description

SPT6 homolog, histone chaperone and transcription elongation factor [Source:VGNC Symbol;Acc:VGNC:93626]

Location

Primary_assembly 12: 44,917,633-44,940,273 forward strand.

Sscrofa11.1:CM000823.5

About this gene

This gene has 2 transcripts (splice variants) and 219 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000019345.5	SUPT6H-201	5202	1612aa	ENSSSCP00000018832.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1JHE4 F1RNB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSSSCT00000054782.3	SUPT6H-202	5072	1603aa	ENSSSCP00000048930.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AYH6 A0A8D1JHD3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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