Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: PTCD2 ENSSSCG00000016975

.

Description

pentatricopeptide repeat domain 2 [Source:VGNC Symbol;Acc:VGNC:91939]

Location

Primary_assembly 16: 48,605,012-48,636,181 forward strand.

Sscrofa11.1:CM000827.5

About this gene

This gene has 3 transcripts (splice variants) and 198 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000018485.5	PTCD2-203	1930	381aa	ENSSSCP00000017985.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1S186 F1SK11	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000091334.2	PTCD2-201	1426	216aa	ENSSSCP00000068254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UFM1 A0A5G2RCA0	-
ENSSSCT00000085059.1	PTCD2-202	1393	277aa	ENSSSCP00000071263.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UGV0 A0A5G2R4K0	-

.

Summary

.

.