Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SMG7 ENSSSCG00000015558

.

Description

SMG7 nonsense mediated mRNA decay factor [Source:VGNC Symbol;Acc:VGNC:93250]

Location

Primary_assembly 9: 124,697,093-124,775,964 forward strand.

Sscrofa11.1:CM000820.5

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000016948.5	SMG7-203	6525	1216aa	ENSSSCP00000016494.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A480EIH5 A0A8D1P6V6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000026288.4	SMG7-201	6104	1170aa	ENSSSCP00000024216.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0UN77 I3LJF6	-
ENSSSCT00000053586.3	SMG7-202	6055	1137aa	ENSSSCP00000050460.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B230 A0A8D0Z0Z7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.