Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SEPTIN8 ENSSSCG00000014285

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Description

septin 8 [Source:VGNC Symbol;Acc:VGNC:92725]

Location

Primary_assembly 2: 135,077,170-135,104,471 reverse strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 5 transcripts (splice variants), 277 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000076173.2	SEPTIN8-204	1743	503aa	ENSSSCP00000069391.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2QWZ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000091077.2	SEPTIN8-202	6971	429aa	ENSSSCP00000074335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1UTK5 A0A5G2RND3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSSSCT00000099343.1	SEPTIN8-203	6959	399aa	ENSSSCP00000080491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FQ67	-
ENSSSCT00000053612.3	SEPTIN8-205	2823	482aa	ENSSSCP00000048379.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AWW1 A0A4X1UVE4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSSSCT00000015608.5	SEPTIN8-201	2699	488aa	ENSSSCP00000015196.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D1P1P6 F1RJU9	-

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Summary

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