Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: PATL1 ENSSSCG00000013124

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Description

PAT1 homolog 1, processing body mRNA decay factor [Source:VGNC Symbol;Acc:VGNC:91189]

Location

Primary_assembly 2: 11,827,773-11,857,691 forward strand.

Sscrofa11.1:CM000813.5

About this gene

This gene has 4 transcripts (splice variants), 212 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSSSCT00000050633.3	PATL1-201	4203	786aa	ENSSSCP00000047869.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0KDV0 A0A8D0YAJ6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSSSCT00000097670.1	PATL1-202	5453	763aa	ENSSSCP00000078098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8W4FIF7	-
ENSSSCT00000014344.5	PATL1-204	4064	771aa	ENSSSCP00000013958.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0LVI3 F1RI83	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSSSCT00000029532.4	PATL1-203	3990	719aa	ENSSSCP00000025818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8D0LVI4 I3LNZ3	-

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Summary

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